BaTS (Bayesian Tip-Significance testing), phylogeny-trait association is defined as the extent to which neighbouring taxa in a phylogenetic tree share a character of interest. This may be a classical phenotypic trait, a molecular attribute, disease
Phylogeny reconstruction made easy.
DNAdistree is a utility for distance-based phylogeny inference from DNA sequences. More precisely, DNAdistree performs several successive steps: 1. it reads DNA sequence alignments (nucleotides or codons); 2. it estimates unbiased pairwise distances
Simulating Sequence Evolution with Site-Specific Interactions. SISSI is a utility tool to generate data of related sequences along a given phylogeny, taking into account user defined system of neighbourhoods and instantaneous rate matrices.
Phight - a phylogeny tree building program Currently, it supports Likelihood method and distance method.
GeneMarker® is a unique genotype analysis software which integrates new technologies enhancing the speed, accuracy and ease of analysis.
SeqVerter is a free sequence file format conversion utility by GeneStudio, Inc. SeqVerter encapsulates a small subset of the features offered by the GeneStudio™ Pro suite of programs.
DARwin is a software package developed for diversity and phylogenetic analysis on the basis of evolutionary dissimilarities.
GeneStudio™ Pro is a modern suite of molecular biology applications for the Windows platform built on sequence format conversion engine, SeqVerter™.
MSight is a new vision in Mass Spectrometry Imaging. MSight, created by the Proteome Informatics Group, was specifically developed for the representation of mass spectra along with data from the separation step.
Malin (Maximum Likelihood Analysis of Intron Evolution) is a utility package for the analysis of eukaryotic gene structure evolution.